Welcome to RH 1.5D’s documentation!

Contents:

• 1. Introduction
  • 1.1. What is RH 1.5D
  • 1.2. Acknowledging RH 1.5D
  • 1.3. What this manual covers
  • 1.4. Comparison with RH
• 2. Installation
  • 2.1. Getting the code
  • 2.2. Dependencies
  • 2.3. Compilation
  • 2.4. Run directory
• 3. Input files
  • 3.1. Configuration files
  • 3.2. Atom and molecule files
  • 3.3. Atmosphere files
  • 3.4. Line lists and wavelength files
• 4. Running the code
  • 4.1. Binaries and execution
  • 4.2. The run directory
  • 4.3. Logs and messages
  • 4.4. Reruns and lack of convergence
  • 4.5. Helper script
• 5. Output file structure
  • 5.1. output_aux.hdf5
  • 5.2. output_indata.hdf5
  • 5.3. output_ray.hdf5
• 6. Command line tools
• 7. Reading output in Python
• 8. Reading output in IDL
• 9. helita interface
  • 9.1. Reading and writing input files
  • 9.2. Reading output files
  • 9.3. Visualisation and notebooks
• 10. Known bugs and limitations
  • 10.1. Current issues
  • 10.2. Planned features